dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01632
Location and strand information: 1949 - 4876 (+)
Family: GH2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.754
Protein molecular weight: 109615.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01633
Location and strand information: 4946 - 6976 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8424
Protein molecular weight: 77069.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01634
Location and strand information: 7038 - 8372 (+)
Family: 2.A.66.1.33
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01635
Location and strand information: 8403 - 9401 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01636
Location and strand information: 9843 - 10796 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01637
Location and strand information: 10809 - 11735 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01638
Location and strand information: 11882 - 13621 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01639
Location and strand information: 13834 - 14886 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.8216
Protein molecular weight: 39480.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01640
Location and strand information: 14887 - 16299 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.829
Protein molecular weight: 53056.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01641
Location and strand information: 16366 - 18516 (+)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 4.8972
Protein molecular weight: 81368.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01642
Location and strand information: 18588 - 19898 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6816
Protein molecular weight: 49617.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01643
Location and strand information: 19963 - 21495 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.1947
Protein molecular weight: 58476.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01644
Location and strand information: 21503 - 21766 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01645
Location and strand information: 21936 - 23015 (+)
Family: 2.A.56.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01646
Location and strand information: 23148 - 23672 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01647
Location and strand information: 23672 - 24964 (+)
Family: 2.A.56.1.5
Protein type: TC
Protein description: Sialic acid TRAP transporter permease protein SiaT

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01648
Location and strand information: 25119 - 25598 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01649
Location and strand information: 25700 - 27181 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01650
Location and strand information: 27200 - 27958 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01651
Location and strand information: 27955 - 28959 (+)
Family: 2.A.56.1.9
Protein type: TC
Protein description: Solute-binding protein

Gene clsuter ID: MGYG000001964_28|CGC1
Gene ID: MGYG000001964_01652
Location and strand information: 28981 - 30177 (+)
Family: 2.A.1.15.18
Protein type: TC
Protein description: Protein TsgA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001964_01632	GH2_e71\|3.2.1.55	arabinan
MGYG000001964_01633	GH35_e6\|3.2.1.23	pectin
MGYG000001964_01639	GH105_e37
MGYG000001964_01640	CE12_e8
MGYG000001964_01641	GH112_e1\|2.4.1.247	humanmilkpolysaccharide
MGYG000001964_01642	GH28_e95\|3.2.1.-	pectin
MGYG000001964_01643	GH51_e14\|3.2.1.55	arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan|pectin

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001964_01632	hypothetical protein	CAZyme	1949	4876	+	GH2
MGYG000001964_01633	hypothetical protein	CAZyme	4946	6976	+	GH35
MGYG000001964_01634	Multidrug export protein MepA	TC	7038	8372	+	2.A.66.1.33
MGYG000001964_01635	HTH-type transcriptional activator RhaS	TF	8403	9401	-	HTH_AraC+HTH_AraC
MGYG000001964_01636	putative multiple-sugar transport system permease YteP	TC	9843	10796	+	3.A.1.1.29
MGYG000001964_01637	hypothetical protein	TC	10809	11735	+	3.A.1.1.29
MGYG000001964_01638	hypothetical protein	null	11882	13621	+	No domain
MGYG000001964_01639	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	13834	14886	+	GH105
MGYG000001964_01640	hypothetical protein	CAZyme	14887	16299	+	CE12
MGYG000001964_01641	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	16366	18516	+	GH112
MGYG000001964_01642	hypothetical protein	CAZyme	18588	19898	+	GH28
MGYG000001964_01643	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	19963	21495	+	GH51
MGYG000001964_01644	hypothetical protein	null	21503	21766	+	DUF6171
MGYG000001964_01645	hypothetical protein	TC	21936	23015	+	2.A.56.1.1
MGYG000001964_01646	hypothetical protein	null	23148	23672	+	DctQ
MGYG000001964_01647	Sialic acid TRAP transporter permease protein SiaT	TC	23672	24964	+	2.A.56.1.5
MGYG000001964_01648	hypothetical protein	null	25119	25598	+	YcxB
MGYG000001964_01649	hypothetical protein	TC	25700	27181	+	8.A.59.2.1
MGYG000001964_01650	putative response regulatory protein	TF	27200	27958	+	HTH_AraC+HTH_AraC
MGYG000001964_01651	Solute-binding protein	TC	27955	28959	+	2.A.56.1.9
MGYG000001964_01652	Protein TsgA	TC	28981	30177	+	2.A.1.15.18
Protein ID	Protein Name	Type	Start	End	Strand	Signature